The nearest airport is NVA - Neiva Benito Salas, located 20.6 km east of San Juan.
Other airports nearby include SVI - San Vincente De Caguan Eduardo Falla Solano (112.3 km south east), CLO - Cali Alfonso Bonilla Aragon Intl (125.2 km north west), PPN - Popayan Guillermo Leon Valencia (135.6 km west), FLA - Florencia Gustavo Artunduaga Paredes (143.5 km south),